Bräutigam K, Cronk Q (2018).  DNA Methylation and the Evolution of Developmental Complexity in Plants. Front Plant Sci. 9:1447. doi: 10.3389/fpls.2018.01447.

Bräutigam K, Soolanayakanahally R, Champigny M, Mansfield S, Douglas C, Campbell MM, Cronk Q (2017). Sexual epigenetics: gender-specific methylation of a gene in the sex determining region of Populus balsamifera. Sci Rep. 7:45388. doi: 10.1038/srep45388.

Tsai AY, Chan K, Ho CY, Canam T, Capron R, Master ER, Bräutigam K (2017). Transgenic expression of fungal accessory hemicellulases in Arabidopsis thaliana triggers transcriptional patterns related to biotic stress and defense response. PLoS One. 12(3):e0173094. doi: 10.1371/journal.pone.0173094. 

Schreiber SG, Hacke UG, Chamberland S, Lowe CW, Kamelchuk D, Bräutigam K, Campbell MM, Thomas BR (2016). Leaf size serves as a proxy for xylem vulnerability to cavitation in plantation trees. Plant Cell Environ. 39(2):272-81. doi: 10.1111/pce.12611. Epub 2015 Oct 19.

 Ensminger I, Chang CYY, Bräutigam K (2015). Tree responses to environmental cues. Advances in Botanical Research 74:229-263

Bräutigam K, Vining KJ, Lafon-Placette C, Fossdal CG, Mirouze M, Marcos JG, Fluch S, Fraga MF, Guevara MÁ, Abarca D, Johnsen O, Maury S, Strauss SH, Campbell MM, Rohde A, Díaz-Sala C, Cervera MT (2013). Epigenetic regulation of adaptive responses of forest tree species to the environment. Ecol Evol. 3(2):399-415. doi: 10.1002/ece3.461. Epub 2013 Jan 17.

Dietzel L, Bräutigam K, Steiner S, Schüffler K, Lepetit B, Grimm B, Schöttler MA, Pfannschmidt T (2011). Photosystem II supercomplex remodeling serves as an entry mechanism for state transitions in Arabidopsis. Plant Cell. 23(8):2964-77. doi: 10.1105/tpc.111.087049. Epub 2011 Aug 31.

Raj S, Bräutigam K, Hamanishi ET, Wilkins O, Thomas BR, Schroeder W, Mansfield SD, Plant AL, Campbell MM (2011). Clone history shapes Populus drought responses. Proc Natl Acad Sci U S A.108(30):12521-6. doi: 10.1073/pnas.1103341108. Epub 2011 Jul 11.

Bräutigam K, Dietzel L, Pfannschmidt T (2010). Hypothesis: A binary redox control mode as universal regulator of photosynthetic light acclimation. Plant Signal Behav. 5(1):81-5.

Wilkins O, Bräutigam K, Campbell MM (2010). Time of day shapes Arabidopsis drought transcriptomes. Plant J. 63(5):715-27. doi: 10.1111/j.1365-313X.2010.04274.x.

Bräutigam K, Dietzel L, Kleine T, Ströher E, Wormuth D, Dietz KJ, Radke D, Wirtz M, Hell R, Dörmann P, Nunes-Nesi A, Schauer N, Fernie AR, Oliver SN, Geigenberger P, Leister D, Pfannschmidt T (2009). Dynamic plastid redox signals integrate gene expression and metabolism to induce distinct metabolic states in photosynthetic acclimation in Arabidopsis. Plant Cell. 21(9):2715-32. doi: 10.1105/tpc.108.062018. 

Pfannschmidt T, Bräutigam K, Wagner R, Dietzel L, Schröter Y,  Steiner S, Nykytenko A (2009). Potential regulation of gene expression in photosynthetic cells by redox regulation and energy state: approaches towards better understanding. Annals of Botany 103(4): 599-697

Wagner R, Dietzel L, Bräutigam K, Fischer W, Pfannschmidt T (2008). The long-term response to fluctuating light quality is an important and distinct light acclimation mechanism that supports survival of Arabidopsis thaliana under low light conditions. Planta. 228(4):573-87. doi: 10.1007/s00425-008-0760-y.

Dietzel L, Bräutigam K, Pfannschmidt T (2008). Photosynthetic acclimation: state transitions and adjustment of photosystem stoichiometry–functional relationships between short-term and long-term light quality acclimation in plants. FEBS J. 275(6):1080-8. doi: 10.1111/j.1742-4658.2008.06264.x.

Bräutigam K, Dietzel L, Pfannschmidt T (2007). Plastid-nucleus communication: Anterograde and retrograde signalling in the development and function of plastids.  Topics in Current Genetics. 19, 409-455

Fey V, Wagner R, Bräutigam K, Pfannschmidt T (2005). Photosynthetic redox control of nuclear gene expression. J Exp Bot. 56(416):1491-8. Epub 2005 Apr 29.

Fey V, Wagner R, Bräutigam K, Wirtz M, Hell R, Dietzmann A, Leister D, Oelmüller R, Pfannschmidt T (2005). Retrograde plastid redox signals in the expression of nuclear genes for chloroplast proteins of Arabidopsis thaliana. J Biol Chem. 18;280(7):5318-28. Epub 2004 Nov 23. Erratum in: J Biol Chem. 2005 Apr 29;280(17):17572.

Gerighausen U, Bräutigam K, Mustafa O, Peter HU (2003). Expansion of vascular plants on an Antarctic island – a consequence of climate change? In Antarctic Biology in a Global Context, Backhuys Publishers, Leiden: 79-83